Soft & Creamy Pumpkin Cream Cheese Muffins

You know that moment when fall hits just right, the air turns crisp, leaves crunch underfoot, and suddenly every corner smells like cinnamon and pumpkin? Yeah, that’s the vibe these Pumpkin Cream Cheese Muffins are made for. But here’s the thing: they’re not your average pumpkin dessert. Inside each bite is this little surprise, a creamy, tangy swirl that turns simple muffins into something kind of unforgettable.

Honestly, if you’ve ever wished your fall baking felt a little more magical and a lot more comforting, this recipe’s got you. Quick to make on a relaxed weekend morning, but nice enough to wow guests at any get-together.

Here’s Why These Pumpkin Cream Cheese Muffins Just Work

Great for those times you want a treat that’s sweet, but not too much. You know the one, when you want to indulge without the sugar crash? These muffins get it.

Ideal for Your Fall Routine. Whether it’s morning coffee, afternoon snack, or after-dinner treat, these muffins slot perfectly into your day and boost your fall mood instantly.

They fit right into your imperfect, beautiful life. No fancy equipment, no intimidating steps, just simple ingredients and real results. Because you’ve got better things to do than stress in the kitchen.

Crowd-Pleasers Without the Fuss. You don’t have to be a baking expert to wow your guests, these muffins look and taste like you spent hours in the kitchen, but they come together super fast.

The Ingredients You’ll Need

Pumpkin Puree: I like using pure pumpkin puree (not the pie filling) because it gives a deep, earthy flavor and keeps the muffins super moist.

  • Vegetable Oil: You can use any neutral oil here, it’s my go-to for keeping the texture soft and tender without overpowering the pumpkin flavor.
  • Eggs: I recommend using large eggs at room temperature, they help bind everything and add that perfect muffin structure.
  • Light Brown Sugar: Maybe my favorite sweetener for fall baking, it adds sweetness with a slight caramel note that pairs so well with pumpkin.
  • Granulated Sugar: It balances the brown sugar and gives a touch of light sweetness. I like how it also helps create a delicate crumb.
  • Whole Milk: It’s best if the milk is at room temp, it helps everything blend more smoothly and keeps the batter consistent.
  • Vanilla Extract: I always add a little vanilla to bring out the warm spice flavors. It makes a quiet but cozy difference.
  • All-Purpose Flour: You can’t go wrong with this, it’s the sturdy base that holds the muffins together without making them dense.
  • Baking Soda & Baking Powder: I like using both for just the right rise. They make these muffins fluffy, not flat.
  • Ground Cinnamon & Ground Ginger: These are my personal spice duo for anything pumpkin. Cinnamon makes it feel cozy, and ginger adds a bit of lively flavor in the background.
  • Salt: A small pinch goes a long way. I recommend not skipping it, it balances the sweetness and deepens all the flavors.
A hand holding one pumpkin cream cheese muffin with a bite taken out of it.

How to Make Pumpkin Cream Cheese Muffins

Alright, let’s make something soft, spiced, and stuffed with creamy goodness. 

Step 1: Let’s get the oven going

Preheat your oven to 375°F (190°C). While it’s heating up, line your muffin pan with paper liners and lightly spray the insides, yep, even the liners. It might sound extra, but trust me, it helps keep the muffins super intact (and cleanup easy peasy).

Step 2: Whisk together your fall base

Combine the oil and pumpkin in a large bowl until it’s smooth, this mix is the secret to extra soft muffins. Then stir in both granulated and light brown sugar, one brings the sweetness, the other adds that caramelly depth that makes people go “wait… what’s in this?!”

Now crack in the eggs, pour in the milk, and add a splash of vanilla extract. Mix everything gently until it looks creamy and kind of cozy. (Yes, batters can feel cozy. This one does.)

Step 3: Time for the dry stuff

Slowly add the flour, cinnamon, ginger, salt, baking soda, and baking powder, mixing as you go. I usually give the dry ingredients a little stir on top before folding them in, fewer lumps, more love.

Don’t overmix. Think: calm folds, like you’re tucking it in for a nap.

Step 4: Fill them up

Scoop the batter into your prepared muffin liners, about ¾ full is the sweet spot. A cookie scoop makes this step a breeze, but two spoons work just fine. 

Step 5: Create a cozy little dip

Using the back of a spoon, gently press the center of each muffin so there’s a little dent for the cream cheese filling.

Not too deep, think “a cozy nest,” not “pumpkin pothole.” 

Step 6: Whip up the creamy core

Blend cream cheese, cornstarch, sugar, vanilla, milk, and a dash of salt together in a small bowl until creamy.

Mix until it’s silky smooth. I usually start with a spoon then switch to a mini whisk, less mess, more control.

Transfer the mixture into a piping bag or zip-top bag with a small corner snipped off. (No piping bag? No problem.)

Step 7: Add the magic

Now pipe that luscious filling right into the center of each muffin, press in slightly and give a gentle squeeze. Make sure a little peeks out on top, that’s the “hello, I’m the creamy part” moment.

Step 8: Sprinkle and bake

Top each muffin with a few pumpkin seeds. They give the perfect crunch to balance all that soft, sweet goodness. 

Pumpkin cream cheese muffins batter in a twelve-cup muffin tin.

Slide your pan into the oven and bake for 16 to 20 minutes. Bake until the tops look firm and golden, and a toothpick inserted off to the side comes out with just a few crumbs.

Step 10: Cool before the dive-in

Leave the muffins in the pan for 5 minutes to cool slightly, then set them on a wire rack to cool fully. The center will firm up as they rest, and the flavor? Even better once they’ve settled a bit.

If you love these, you’ll definitely want to try my pumpkin chocolate chip muffins too, they’re packed with melty chocolate and all the cozy fall flavors you crave! 

Mistakes to Avoid with Pumpkin Cream Cheese Muffins

Not softening your cream cheese enough:

If it’s too cold, the filling won’t mix smoothly and can turn lumpy. I like to let it sit at room temp for about 30 minutes before using, or give it a gentle microwave nudge for 10–15 seconds.

Using canned pumpkin pie filling instead of pure pumpkin:

Sounds silly, but it’s an easy mix-up! The pie filling already has spices and sugar added, which will totally throw off the flavor and texture. I always double-check the label before adding it to my batter.

Using a dark-colored muffin tin without adjusting the time:

Dark pans heat up faster, so if that’s what you’re using, your muffins might bake quicker or brown more on the bottom. For safety, check a few minutes before the timer goes off.

Not measuring ingredients properly:

The texture can be easily affected if there’s too much flour or too little sugar. I recommend spooning flour into your measuring cup and leveling it off for accuracy.

Not letting them cool before removing:

These muffins are delicate when hot. Give them a few minutes in the pan before transferring them to a cooling rack.

Pumpkin cream cheese muffins on a marble surface topped with toasted pumpkin seeds.

What to Serve with Pumpkin Cream Cheese Muffins

  • A steamy mug of cinnamon-spiced hot chocolate: It’s rich, cozy, and the chocolate-cinnamon combo hugs the pumpkin in all the right ways.
  • Warm apple cider: its soft spices and apple notes blend beautifully with pumpkin. It’s a classic fall duo for a reason.
  • Vanilla bean or maple ice cream: Just a little scoop on the side if you’re enjoying one as dessert. 
  • A drizzle of salted caramel: Trust me, this will turn the muffin into a full-on bakery-style experience. Especially with the cream cheese swirl.
  • Toasted pecans or walnuts on the side: If you want a snack-y crunch to contrast the softness of the muffin, these buttery nuts are the answer.

How to Store Pumpkin Cream Cheese Muffins

Store in the fridge (up to 5 days)

Because of the cream cheese filling, it’s best to keep them in an airtight container in the fridge. I like to line the bottom with a paper towel to catch any extra moisture.

Freeze for later (up to 2 months)

Tightly cover each muffin with plastic wrap before storing them in a freezer bag. Label them with the date.

Reheat like a pro

Leave to thaw in the fridge overnight, then reheat in a 350°F oven for 5 to 7 minutes or microwave briefly for 15–20 seconds. The filling gets warm and gooey again, so good!

Amazing Fall Recipes to Bake

Soft & Creamy Pumpkin Cream Cheese Muffins

You’re going to love how soft and cozy these Pumpkin Cream Cheese Muffins are. The creamy center is a little surprise that makes them extra special, perfect for any time you need a quick fall pick-me-up.
Prep Time15 minutes
Cook Time20 minutes
Total Time35 minutes
Servings: 14 muffins
Calories: 240kcal

Ingredients

For the Muffins:

  • 1 cup pure pumpkin puree
  • 2 large eggs at room temperature
  • cup vegetable oil
  • 2 teaspoons vanilla extract
  • cup granulated sugar
  • cup packed light brown sugar
  • ¼ cup whole milk
  • 2 cups all-purpose flour
  • 1 teaspoon baking soda
  • 1 teaspoon baking powder
  • 1 teaspoon ground cinnamon
  • 1 teaspoon ground ginger
  • ½ teaspoon salt

For the Cream Cheese Filling:

  • 8 oz cream cheese softened
  • 7 tablespoons granulated sugar
  • 1 tablespoon cornstarch
  • 1 teaspoon vanilla extract
  • 1 to 2 teaspoons whole milk
  • A small handful of pumpkin seeds

Instructions

  • Start by heating your oven to 375°F (190°C). While it’s warming, line your muffin tin with paper liners and lightly spray them with non-stick spray, even the liners! This extra step ensures your muffins come out effortlessly and makes cleanup quick.
  • In a large bowl, whisk together the vegetable oil and pumpkin puree until smooth and silky. Add both the granulated sugar and brown sugar, one for sweetness, the other for that deep caramel flavor that makes these irresistible. Crack the eggs, add the milk, and mix in the vanilla extract. Stir everything gently until you have a creamy, cozy batter ready to go.
  • Now sprinkle in the flour, cinnamon, ginger, salt, baking soda, and baking powder. Give the dry ingredients a quick stir before folding them carefully into the wet mixture.
  • Spoon the batter into the lined muffin cups, filling each about three-quarters full. You can use a cookie scoop to make this easier, or simply two spoons, whatever works best for you.
  • Using the back of a spoon, gently press into the center of each muffin to create a little well, just a shallow dip to hold the cream cheese filling snugly.
  • For the filling, beat the softened cream cheese with cornstarch, sugar, vanilla, milk, and a pinch of salt until smooth and creamy. I usually start mixing with a spoon, then switch to a small whisk to get that perfect silky texture. Transfer this filling into a piping bag or a plastic bag with the corner snipped off.
  • Pipe the cream cheese mixture right into the wells of each muffin. Don’t be shy, press the tip down a little and squeeze gently so some of the filling shows on top, teasing that delicious surprise inside.
  • Sprinkle pumpkin seeds over the tops to add a pleasant crunch and a little fall flair. Cook the muffins in the oven preheated to the right temperature for about 16 to 20 minutes.
  • Let the muffins cool in the pan for a few minutes before transferring them. This helps the cream cheese center set perfectly and lets the flavors deepen, so every bite is pure fall comfort.

Notes

  • If you want a little more spice kick, toss in a pinch of freshly grated nutmeg or a dash of cloves, it amps up the fall flavor without overwhelming.
  • If you like a little crunch beyond pumpkin seeds, sprinkle some crushed graham crackers on top right before baking, it adds a subtle sweetness and texture.
Category: Breakfast
Cuisine: American
Pumpkin Muffins Recipe
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My name is Chloe. I’m here to share my passion for baking with you, providing simple and direct recipes that anyone can enjoy baking at home.

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